Abstract
The channel-forming properties of two analogs of gramicidin, gramicidin- ethylenediamine (gram-EDA), and gramicidin-N,N-dimethylethylenediamine (gram- DMEDA) were studied in planar lipid bilayers, using protons as the permeant ion. These peptides have positively charged amino groups tethered to their C- terminal ends via a linker containing a carbamate group. Gram-DMEDA has two extra methyl groups attached to the terminal amino group, making it a bulkier derivative. The carbamate groups undergo thermal cis-trans isomerization on the 10-100-ms time scale. The conductance behavior of gram-EDA is found to be markedly voltage dependent, whereas the behavior of gram-DMEDA is not. In addition, voltage affects the cis-trans ratios of the carbamate groups of gram-EDA, but not those of gram-DMEDA. A model is proposed to account for these observations, in which voltage can promote the binding of the terminal amino group of gram-EDA to the pore in a 'ball-and-chain' fashion. The bulkiness of the gram-DMEDA derivative prevents this binding.
Original language | English |
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Pages (from-to) | 2465-2475 |
Number of pages | 11 |
Journal | Biophysical Journal |
Volume | 73 |
Issue number | 5 |
DOIs | |
State | Published - 1997 |
Keywords
- Amino Acid Sequence
- Carbamates/chemistry
- Chlorides/metabolism
- Electric Conductivity
- Electrophysiology
- Gramicidin/chemistry
- Hydrogen-Ion Concentration
- Ion Channel Gating
- Ion Channels/chemistry
- Isomerism
- Lipid Bilayers/metabolism
- Models, Molecular
- Molecular Conformation
- Molecular Sequence Data
- Protons