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Understanding the genetic complexity of puberty timing across the allele frequency spectrum

  • ABCTB Investigators
  • , The Lifelines Cohort Study
  • , The Danish Blood Donor Study
  • , The Biobank Japan Project
  • , The China Kadoorie Biobank Collaborative Group
  • University of Sydney
  • Medical Research Council Epidemiology Unit
  • University of Bergen
  • Norwegian Institute of Public Health
  • University of Cambridge
  • University of Lausanne
  • University of Oxford
  • RIKEN
  • University of Münster
  • University of Copenhagen
  • deCODE Genetics
  • University of Iceland
  • Charité – Universitätsmedizin Berlin
  • Shizuoka General Hospital
  • University of Shizuoka
  • Duke University
  • University of Montreal
  • Quantinuum Research LLC
  • The Children's Hospital of Philadelphia
  • Erasmus University Rotterdam
  • University of Edinburgh
  • Brigham and Women's Hospital
  • University of Pennsylvania
  • University of North Carolina at Chapel Hill
  • University of Groningen
  • IRCCS Ospedale Infantile Burlo Garofolo - Trieste
  • University of Trieste
  • University of Kentucky
  • School of Public Health
  • University of Oulu
  • National Institute for Health and Welfare
  • The University of Tokyo
  • Karolinska Institutet
  • Boston University
  • NHLBI’s and Boston University’s Framingham Heart Study
  • University of Tartu
  • King's College London
  • Queensland Institute of Medical Research
  • University of Queensland
  • Augsburg University
  • Leiden University
  • National Research Council of Italy
  • University of Split
  • Algebra University
  • University of Sassari
  • University of Bristol
  • IRCCS Ospedale San Raffaele
  • Icelandic Heart Association
  • National Institutes of Health
  • University of Newcastle
  • Hunter Medical Research Institute, Australia
  • Vrije Universiteit Amsterdam
  • University of Greifswald
  • University of Toronto
  • University of California at Irvine
  • Medical College of Wisconsin
  • Friedrich-Alexander University Erlangen-Nürnberg
  • Royal Marsden Hospital
  • Hannover Medical School
  • N.N. Alexandrov Research Institute of Oncology and Medical Radiology
  • German Cancer Research Center
  • University of Hamburg
  • Mayo Clinic
  • University of Sheffield
  • University of Minnesota Twin Cities
  • Harvard University
  • University of Westminster
  • University of Helsinki
  • National University of Singapore
  • Agency for Science, Technology and Research, Singapore
  • Pennsylvania State University
  • Complejo Hospitalario Universitario de Santiago
  • Hospital Clínico San Carlos de Madrid
  • Biomedical Network on Rare Diseases (CIBERER)
  • Helmholtz Zentrum München - German Research Center for Environmental Health
  • AP-HP and Versailles SQY University
  • University of Southern California
  • University of Western Australia
  • University of Melbourne
  • Robert Bosch Foundation
  • University of Tübingen
  • Centre for Epidemiology and Biostatistics
  • Lund University
  • Stanford University
  • Hebrew SeniorLife Institute for Aging Research
  • Russian Academy of Sciences
  • Ufa University of Science and Technology
  • University of Oslo
  • City of Hope National Medical Center
  • KU Leuven
  • Flanders Institute for Biotechnology
  • Queensland University of Technology
  • University of Eastern Finland
  • NIHR Cambridge Biomedical Research Centre
  • Technical University of Munich
  • Cyprus Institute of Neurology and Genetics
  • Cancer Council Victoria
  • Helsinki University Hospital
  • Memorial Sloan-Kettering Cancer Center
  • Massachusetts General Hospital
  • Broad Institute
  • Wellcome Sanger Institute
  • Sjællands Universitetshospital
  • Ludwig Maximilian University of Munich
  • MASA
  • Fondazione IRCCS Istituto Nazionale dei Tumori
  • Carmel Medical Center
  • IRCCS Istituto Neurologico Mediterraneo Neuromed - Pozzilli (IS)
  • University of Thessaly
  • Netherlands Cancer Institute
  • Antoni van Leeuwenhoek Hospital
  • Cornell University
  • American Cancer Society
  • Northern Finland Laboratory Centre Oulu
  • Vanderbilt University
  • Local Health Toscana Centro
  • University of Texas Health Science Center at Houston
  • Amsterdam UMC
  • German Center for Diabetes Research
  • University of Southern Denmark
  • Hunter New England Health
  • Bavarian Health and Food Safety Authority (LGL)
  • Peking University
  • University of Exeter
  • Centre Hospitalier de l’Université de Montréal Research Center
  • Aarhus University

Research output: Contribution to journalArticlepeer-review

29 Scopus citations

Abstract

Pubertal timing varies considerably and is associated with later health outcomes. We performed multi-ancestry genetic analyses on ~800,000 women, identifying 1,080 signals for age at menarche. Collectively, these explained 11% of trait variance in an independent sample. Women at the top and bottom 1% of polygenic risk exhibited ~11 and ~14-fold higher risks of delayed and precocious puberty, respectively. We identified several genes harboring rare loss-of-function variants in ~200,000 women, including variants in ZNF483, which abolished the impact of polygenic risk. Variant-to-gene mapping approaches and mouse gonadotropin-releasing hormone neuron RNA sequencing implicated 665 genes, including an uncharacterized G-protein-coupled receptor, GPR83, which amplified the signaling of MC3R, a key nutritional sensor. Shared signals with menopause timing at genes involved in DNA damage response suggest that the ovarian reserve might signal centrally to trigger puberty. We also highlight body size-dependent and independent mechanisms that potentially link reproductive timing to later life disease.

Original languageEnglish
Pages (from-to)1397-1411
Number of pages15
JournalNature Genetics
Volume56
Issue number7
DOIs
StatePublished - Jul 2024

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