Lamin A/C loss promotes R-loop-mediated genomic instability and poor survival in small-cell lung cancer

  • Christopher W. Schultz
  • , Sourav Saha
  • , Anjali Dhall
  • , Yang Zhang
  • , Parth Desai
  • , Lorinc S. Pongor
  • , David A. Scheiblin
  • , Valentin Magidson
  • , Ravi P. Shuklah
  • , Robin Sebastian
  • , Umeshkumar M. Vekariya
  • , Shahbaz Ahmed
  • , Yilun Sun
  • , Christophe Redon
  • , Suresh Kumar
  • , Manan Krishnamurthy
  • , Henrique B. Dias
  • , Vasilisa Aksenova
  • , Elizabeth Giordano
  • , Nobuyuki Takahashi
  • Michael Nirula, Mohit Arora, Chiori Tabe, Maria Sebastian Thomas, Rajesh Kumar, Yasuhiro Arakawa, Ukhyun Jo, Tomasz Skorski, Beverly A. Teicher, Roshan Shreshta, Mirit I. Aladjem, Stephen Lockett, Mary Dasso, Yves Pommier, Ajit K. Sharma, Anish Thomas

Research output: Contribution to journalArticlepeer-review

1 Scopus citations

Abstract

Lamin A/C (LMNA), a key component of the nuclear envelope, is essential for maintaining nuclear integrity and genome organization [W. Xie et al., Curr. Biol. 26, 2651–2658 (2016)]. While LMNA dysregulation has been implicated in genomic instability across cancer and aging, the underlying mechanisms remain poorly understood [S. Graziano et al., Nucleus 9, 258–275 (2018)]. Here, we define a mechanistic role for LMNA in preserving genome stability in small-cell lung cancer (SCLC), a malignancy marked by extreme genomic instability [N. Takahashi et al., Cancer Res. Commun. 2, 503–517 (2022)]. LMNA depletion promotes R-loop accumulation, transcription-replication conflicts, replication stress, DNA breaks, and micronuclei formation. Mechanistically, LMNA deficiency disrupts nuclear pore complex organization, specifically reducing phenylalanine-glycine (FG)-nucleoporin incorporation, resulting in impaired RNA export and nuclear retention of RNA. LMNA expression is repressed by EZH2 and reexpressed during SCLC differentiation from neuroendocrine (NE) to non-NE states, and low LMNA levels correlate with poor clinical outcomes. These findings establish LMNA as a key regulator of nuclear transport and genome integrity, linking nuclear architecture to SCLC progression and therapeutic vulnerability.

Original languageEnglish
Article numbere2503387122
Pages (from-to)e2503387122
JournalProceedings of the National Academy of Sciences of the United States of America
Volume122
Issue number43
DOIs
StatePublished - Oct 28 2025

Keywords

  • Cell Line, Tumor
  • DNA Replication
  • Genomic Instability
  • Humans
  • Lamin Type A/genetics
  • Lung Neoplasms/genetics
  • Small Cell Lung Carcinoma/genetics

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