TY - JOUR
T1 - A clinically relevant polymorphism in the Na+/taurocholate cotransporting polypeptide (NTCP) occurs at a rheostat position
AU - Ruggiero, Melissa J.
AU - Malhotra, Shipra
AU - Fenton, Aron W.
AU - Swint-Kruse, Liskin
AU - Karanicolas, John
AU - Hagenbuch, Bruno
N1 - Copyright © 2020 The Authors. Published by Elsevier Inc. All rights reserved.
PY - 2021/1/1
Y1 - 2021/1/1
N2 - Conventionally, most amino acid substitutions at "important"protein positions are expected to abolish function. However, in several soluble-globular proteins, we identified a class of nonconserved positions for which various substitutions produced progressive functional changes; we consider these evolutionary "rheostats". Here, we report a strong rheostat position in the integral membrane protein, Na+/taurocholate (TCA) cotransporting polypeptide, at the site of a pharmacologically relevant polymorphism (S267F). Functional studies were performed for all 20 substitutions (S267X) with three substrates (TCA, estrone-3-sulfate, and rosuvastatin). The S267X set showed strong rheostatic effects on overall transport, and individual substitutions showed varied effects on transport kinetics (Km and Vmax) and substrate specificity. To assess protein stability, we measured surface expression and used the Rosetta software (https://www.rosettacommons.org) suite to model structure and stability changes of S267X. Although buried near the substrate-binding site, S267X substitutions were easily accommodated in the Na+/TCA cotransporting polypeptide structure model. Across the modest range of changes, calculated stabilities correlated with surfaceexpression differences, but neither parameter correlated with altered transport. Thus, substitutions at rheostat position 267 had wide-ranging effects on the phenotype of this integral membrane protein. We further propose that polymorphic positions in other proteins might be locations of rheostat positions.
AB - Conventionally, most amino acid substitutions at "important"protein positions are expected to abolish function. However, in several soluble-globular proteins, we identified a class of nonconserved positions for which various substitutions produced progressive functional changes; we consider these evolutionary "rheostats". Here, we report a strong rheostat position in the integral membrane protein, Na+/taurocholate (TCA) cotransporting polypeptide, at the site of a pharmacologically relevant polymorphism (S267F). Functional studies were performed for all 20 substitutions (S267X) with three substrates (TCA, estrone-3-sulfate, and rosuvastatin). The S267X set showed strong rheostatic effects on overall transport, and individual substitutions showed varied effects on transport kinetics (Km and Vmax) and substrate specificity. To assess protein stability, we measured surface expression and used the Rosetta software (https://www.rosettacommons.org) suite to model structure and stability changes of S267X. Although buried near the substrate-binding site, S267X substitutions were easily accommodated in the Na+/TCA cotransporting polypeptide structure model. Across the modest range of changes, calculated stabilities correlated with surfaceexpression differences, but neither parameter correlated with altered transport. Thus, substitutions at rheostat position 267 had wide-ranging effects on the phenotype of this integral membrane protein. We further propose that polymorphic positions in other proteins might be locations of rheostat positions.
KW - Amino Acid Substitution
KW - Biological Transport
KW - Estrone/analogs & derivatives
KW - HEK293 Cells
KW - Humans
KW - Kinetics
KW - Organic Anion Transporters, Sodium-Dependent/chemistry
KW - Polymorphism, Genetic
KW - Protein Stability
KW - Rosuvastatin Calcium/metabolism
KW - Symporters/chemistry
KW - Taurocholic Acid/metabolism
UR - http://www.scopus.com/inward/record.url?scp=85102957245&partnerID=8YFLogxK
U2 - 10.1074/jbc.RA120.014889
DO - 10.1074/jbc.RA120.014889
M3 - Article
C2 - 33168628
AN - SCOPUS:85102957245
SN - 0021-9258
VL - 296
SP - 100047
JO - Journal of Biological Chemistry
JF - Journal of Biological Chemistry
M1 - 100047
ER -