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Lab Overview
My laboratory focuses on understanding the molecular basis of T lymphocyte differentiation and function. In particular, we have employed forward and reverse genetic approaches to elucidate the signaling and transcriptional pathways that regulate these processes. In the course of this work, we have generated numerous new transgenic and knockout mouse models, most recently to assess the specific and redundant roles of ThPOK as a key regulator of T cell development, and to dissect its expression pattern and transcriptional control mechanisms in vivo. We have also initiated work in the zebrafish model, in order to exploit the advantages of this system for genetic screens to identify novel regulators of T cell development and lymphomagenesis. Thus, we have generated new CD4 and ThPOK reporter fish, as well as ThPOK knockout fish, which will both greatly facilitate the study of T helper development and function in zebrafish, and provide the basis for their efficient genetic dissection. Finally, we have discovered a new and so far unrecognized role of ThPOK as an oncogene, using novel animal models that we have generated. This work suggests a widespread and important role of ThPOK in diverse human cancers, and has become a major new focus of my lab. Our work in elucidating the process of CD4/CD8 lineage choice and identifying the key role of ThPOK represents a unique and widely recognized contribution to the field. These findings have important implications for therapeutic manipulation of the cell-based immune system including potentially for cancer treatment.
Research interests
Regulation of T lymphocyte development, CD4/CD8 lineage commitment and oncogenesis.
- Analyzing the role of the transcription factor ThPOK in CD4/CD8 lineage choice, and in other hematopoietic processes.
- Using ZFN and CRISPR approaches to dissect gene regulatory elements in mouse models.
- Developing novel zebrafish models to elucidate pathways controlling T cell development.
- Using mouse and zebrafish knockout models to reveal novel mechanisms of oncogenesis.
Research interests
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Collaborations and top research areas from the last five years
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CD4/CD8 Lineage Commitment
Kappes, D. J., Jan 1 2025, Encyclopedia of Immunobiology. Elsevier, p. V1:629-V1:640Research output: Chapter in Book/Report/Conference proceeding › Chapter › peer-review
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Modeling Malignant Mesothelioma in Genetically Engineered Mice
Kadariya, Y., Sementino, E., Hua, X., Kappes, D. J. & Testa, J. R., Jan 2025, In: Current Protocols in Microbiology. 5, 1, p. e70086 e70086.Research output: Contribution to journal › Article › peer-review
Open Access2 Scopus citations -
Super-enhancer profiling reveals ThPOK/ZBTB7B, a CD4+ cell lineage commitment factor, as a master regulator that restricts breast cancer cells to a luminal non-migratory phenotype
Arcuschin, C. D., Kahrizi, K., Sayaman, R. W., DiBenedetto, C., Salaberry, P. J., Pirker, R., Shen, Y., Zakraoui, O., Schwarzer, C., Scapozza, A., Caruso, J. A., Betancur, P., Saba, J. D., Coppé, J. P., Barcellos-Hoff, M. H., Kappes, D., van ‘t Veer, L., Schor, I. E. & Muñoz, D. P., Nov 13 2025, In: Cellular and Molecular Life Sciences. 82, 1, p. 397 397.Research output: Contribution to journal › Article › peer-review
Open Access -
Doubling down to make killer T cells
Kappes, D. & Wiest, D. L., Aug 2023, In: Nature Immunology. 24, 9, p. 1407-1408 2 p.Research output: Contribution to journal › Comment/debate
1 Scopus citations -
Interferon-gamma signaling promotes melanoma progression and metastasis
Zhou, B., Basu, J., Kazmi, H. R., Chitrala, K. N., Mo, X., Preston-Alp, S., Cai, K. Q., Kappes, D. & Zaidi, M. R., Jan 27 2023, In: Oncogene. 42, 5, p. 351-363 13 p.Research output: Contribution to journal › Article › peer-review
Open Access17 Scopus citations
Press/Media
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Fox Chase Cancer Center: New Discovery Expands on Master Regulator ThPOK's Known Functions and Implications for Cancer
07/24/23
1 item of Media coverage
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Fox Chase Researchers Identify Key Molecular Circuit Regulating Gut Immune Function
09/8/21
1 item of Media coverage
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Fox Chase Cancer Center: Historic Discovery of ThPOK Gene Honored in Journal Retrospective
07/9/21
1 item of Media coverage
Press/Media